Photoluminescence spectra of DNA and ADP in photon traps under ultraviolet excitation
Authors: Gorelik V.S., Dovbeshko G.I., Pyatyshev A.Yu.  | Published: 04.04.2016 |
Published in issue: #2(65)/2016 | |
DOI: 10.18698/1812-3368-2016-2-25-33 | |
Category: Physics | Chapter: Optics | |
Keywords: photoluminescence, DNA, ADP, laser, photon trap, ultraviolet radiation, spectrum |
The main purpose of the article is to examine and record the photoluminescence spectra of deoxyribonucleic acid and adenosine diphosphate in photon traps under ultraviolet radiation. The findings of the research show that in the small (~ 1 mm3) volume of photon trap radiation trapping occurs in the substance under study. There is a significant redistribution of intensity, due to the transition from spontaneous luminescence to superluminescence. On the basis of the experiments conducted we conclude that laser generation in deoxyribonucleic acid and similar in structure biological compounds is possible.
References
[1] Duguid J.G., Bloomfield V.A., Benevides J.M., Thomas Jr.G.J. DNA Melting Investigated by Differential Scanning Calorimetry and Raman Spectroscopy. Biophysical Journal, 1996, vol. 71, iss. 6, pp. 3350-3360.
[2] Alberts B., Johnson A., Lewis J., Raff M., Roberts K., Walter P. Molecular Biology of the Cell. 4th ed. N.Y., Garland Science, 2002. 1392 p.
[3] Butler J.M. Forensic DNA Typing: Biology and Technology behind STR Markers. London, Academic Press, 2001. 335 p.
[4] Watson J.D., Crick F.H.C. Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid. Nature, 1953, vol. 171, no. 4356, pp. 737-738.
[5] Berg J.M., Tymoczko J.L., Stryer L. Biochemistry. 7th ed. N.Y., W.H. Freeman and Company, 2012. 608 p.
[6] Ghosh A., Bansal M. A glossary of DNA structures from A to Z. Acta Crystallographica Section D, 2003, vol. 59, part 4, pp. 620-626.
[7] Michelson A.M. The chemistry of nucleosides and nucleotides. London, N.Y., Academic Press, 1963. 667 p.
[8] Kretovich V.L., Shol’ts K.F. Metody sovremennoy biokhimii [Methods of Modern Biochemistry]. Moscow, Nauka Publ., 1975. 176 p.
[9] Stimson M.M., Reuter M.A. Fluorescence of Purines and Pyrimidines. Journal of the American chemical society, 1941, vol. 63, iss. 3, pp. 697-699.
[10] Adrien A., Brown D.J. Purine Studies. Part I. Stability to Acid and Alkali. Solubility. Ionization. Comparison with Pteridines. Journal of the Chemical Society, 1954, pp. 2060-2071.
[11] Pisarevskii A.N., Cherenkevich S.N., Andrianov V.T. Fluorescence spectrum and quantum yield of DNA in solution. Zhurnal Prikladnoi Spektroskopii, 1966, vol. 5, no. 5, pp. 621-624.
[12] Yashchuk V.M. Features of the DNA and RNA Luminescence. Mat. XIX Mezhdunar. shkoly-seminara "Spektroskopiya molekul i kristallov" [Proc. of the XIX International Workshop-School "Spectroscopy of Molecules and Crystals]. Ukraina, Krym, Beregovoe, 20-27 Sept. 2009. 42 p. (in Russ.).
[13] Yashchuk V.M., Kuclrya V.Yu., Losytskyy M.Yu., Dubey I.Ya., Ohulchanskyy T.Y., Suga H., Yarmoluk S.M. The effect of triplet-triplet excitation energy transfer on the DNA self-protection mechanism. Naukov. zapiski NaUKMA. Ser. Fiziko-matematichn. nauki [Scientific Notes NaUKMA. Ser. Phys. and Math. Sciences], 2006, vol. 51, pp. 48-56.
[14] Yashchuk V.M., Kudrya V.Yu., Losytskyy M.Yu., Suga H., Ohulchanskyy T.Y. The nature of the electronic excitations capturing centers in the DNV. Journal of Molecular Liquids, 2006, vol. 127, iss. 1-3, pp. 79-83.
[15] Yashchuk V.M., Kudrya V.Yu., Levchenko S.M., Yevtushenko N.V. Some peculiarities of electronic excitation energy structure of the biologic polynucleotides and processes of triplet excitation trapping. Naukov. zapiski NaUKMA. Ser. Fiziko-matematichn. nauki [Scientific Notes NaUKMA. Ser. Phys. and Math. Sciences], 2007, vol. 61, pp. 39-42.
[16] Vigny P., Favre A. Fluorescence and photochemistry of oligocytidylic and polycytidylic acids in aqueous solution. Photochemistry and Photobiology, 1974, vol. 20, iss. 4, pp. 345-349.
[17] Morgan J.P., Daniels M. Excited states of DNA and its components at room temperature - III. Spectra, polarization and quantum yields of emissions from ApA and poly rA*. Photochemistry and Photobiology, 1980, vol. 31, iss. 2, pp. 101-113.
[18] Yashchuk V.M., Yarmoluk S.M., Kudrya V.Yu., Losytskyy M.Yu., Tokar V.P., Kravchenko V.M., Kovalska V.B., Balanda A.O., Kryvotenko D.V. Optical Biomedical Diagnostics: Sensors with Optical Response Based on Two-Photon Excited Luminescent Dyes for Biomolecules Detection. Advances in Optical Technologies, 2008. vol. 2008, pp. 908246-908257.
[19] Shevchenko V.B., Datsenko O.I., Shablikin O.V., Osadchuk T.V., Lyakhov O.M., Pivovarenko Yu.V., Makara V.A. Estimation of the Ros in the Presence of Biologically Active Substances by Porous Silicon Fluorescence. Ukrains’kiy Biokhimichniy Zhurnal [The Ukrainian Biochemical Journal], 2012, vol. 84, no. 4, pp. 74-78 (in Russ.).
[20] Boyko V., Dovbeshko G., Fesenko O., Gorelik V., Moiseenko V., Romanyuk V., Shvets T., Vodolazkyy P. New Optical Properties of Synthetic Opals Infiltrated by DNA. Molecular Crystals and Liquid Crystals, 2011, vol. 535, iss. 1, pp. 30-41.
[21] Ito M., Kobayashi T., Ito Y, Hayashida T., Nii D., Umemura K., Homma Y. Intense photoluminescence from dried double-stranded DNA and single-walled carbon nanotube hybrid. Applied Physics Letters, 2014, vol. 104, iss. 4, pp. 043102-1-043102-3.
[22] Kim Y.S., Lee U.R., Lee J.E., Cho M.J., Jung-Il Jin, Shin D.H., Choi Suk-Ho, Choi D.H. Photoactive Deoxyribonucleic Acid (DNA) Bearing Carbazole Moieties and Its Photoluminescence Behavior with Ir (III) Complex. Molecular Crystals and Liquid Crystals, 2010, vol. 519, iss. 1, pp. 227-233.
[23] Murphy C.J., Brauns E.B., Gearheart L. Quantum dots as inorganic DNA-binding proteins. Material research society Processing, 1996, vol. 452, pp. 597-601.
[24] Walaas E. Fluorescence of Adenine and Inosine Nucleotides. Acta Chemica Scandinavica, 1963, vol. 17, pp. 461-463.
[25] Bdrresen H.CHR. On the luminescence properties of some purines and pyrimidines. Acta Chemica Scandinavica, 1963, vol. 17, pp. 921-929.
[26] Kumar A., Prasher P., Singh P. A fluorescent probe for estimation of adenosine diphosphate and monitoring of glucose metabolism. Organic & Biomolecular Chemistry, 2014, iss. 12, pp. 3071-3079.
[27] Jabs C.M., Ferrell W.J., Robb H.J. Plasma ADP levels: Direct determination with luciferase luminescence using a biometer. Clinical Biochemistry, 1978, vol. 11, iss. 5, pp. 190-193.
[28] Gorman M.W., Marble D.R., Ogimoto K., Feigl E.O. Measurement of adenine nucleotides in plasma. Luminescence, 2003, vol. 18, iss. 3, pp. 173-181.
[29] Soffer B.H., McFarland B.B. Continuously tunable, narrow-band organic dye lasers. Applied Physics Letters, 1967, vol. 10, pp. 266-267.
[30] Svelto О. Principles of Lasers. N.Y., Plenum Publishing, 1976. 370 p.
[31] Landsberg G.S. Optika [Optics]. Moscow, Nauka Publ., 1976. 926 p.